LPAL13_340034200

kinetoplast polyadenylation/uridylation factor 1
Leishmania panamensis MHOM/COL/81/L13 OG6: OG6_138923 OG7: OG7_0018045 98 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
Applies on "Apply filters".
Reset
⬇ CSV
Network view all shared interactors, plus up to 150 more
Show:

Selection: Shift+drag also box-selects. Drag any selected node to move the whole selection.
Interactions 98 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
LPAL13_300035800 ⚠
valyl-tRNA synthetase, putative
— OG7
LPAL13_180006000 ⚠
alpha glucosidase II subunit, putative
— OG7
LPAL13_200007200 ⚠
deoxyhypusine synthase
— OG7
LPAL13_210005200 ⚠
hypothetical protein, conserved
— OG7
LPAL13_310031700 ⚠
calreticulin, putative
— OG7
LPAL13_310036300 ⚠
Component of IIS longevity pathway SMK-1, put
— OG7
LPAL13_300012600 ⚠
nuclear movement protein, putative
— OG7
LPAL13_300039000 ⚠
DNA ligase I, putative
— OG7
LPAL13_220008000 ⚠
hypothetical protein, conserved
— OG7
LPAL13_060015400 ⚠
glucosamine-fructose-6-phosphate aminotransfe
— OG7
LPAL13_300029900 ⚠
formate--tetrahydrofolate ligase
— OG7
LPAL13_300011800 ⚠
histidyl-tRNA synthetase, putative
— OG7
LPAL13_140019200 ⚠
inositol-3-phosphate synthase
— OG7
LPAL13_290027900 ⚠
NOL1/NOP2/sun family, putative
— OG7
LPAL13_200037300 ⚠
cleavage and polyadenylation specificity fact
— OG7
LPAL13_030013300 ⚠
inorganic pyrophosphatase, putative
— OG7
LPAL13_210014900 ⚠
aspartyl-tRNA synthetase, putative
— OG7
LPAL13_320048400 ⚠
Gar1/Naf1 RNA binding region containing prote
— OG7
LPAL13_050012700 ⚠
hypothetical protein, conserved
— OG7
LPAL13_350070800 ⚠
rab-like GTPase activating protein, putative
— OG7
LPAL13_310024900 ⚠
dihydrouridine synthase (Dus), putative
— OG7
LPAL13_250006900 ⚠
cleavage and polyadenylation specificity fact
— OG7
LPAL13_030006400 ⚠
ATP-binding cassette protein subfamily F, mem
— OG7
LPAL13_350070700 ⚠
disgorgin, putative
— OG7
LPAL13_350031400 ⚠
dipeptidyl-peptidase 8-like serine peptidase,
— OG7
LPAL13_330020900 ⚠
protein kinase, putative
— OG7
LPAL13_320040100 ⚠
mitochondrial RNA binding protein, putative
— OG7
LPAL13_070016800 ⚠
RNA-editing complex protein, putative
— OG7
LPAL13_080012700 ⚠
MRB1-associated protein, putative
— OG7
LPAL13_310011500 ⚠
mitochondrial RNA binding protein, putative
— OG7
LPAL13_300008000 ⚠
mitochondrial RNA binding protein 1, putative
— OG7
LPAL13_010005400 ⚠
KREL1
— OG7
LPAL13_200065600 ⚠
mitochondrial RNA ligase 2
— OG7
LPAL13_300013700 ⚠
mitochondrial oligo_U binding protein TBRGG1,
— OG7
LPAL13_300012700 ⚠
hypothetical protein, conserved
— OG7
LPAL13_150005300 ⚠
Possible lysine decarboxylase, putative
— OG7
LPAL13_340008900 ⚠
hypothetical protein, conserved
— OG7
LPAL13_340031800 ⚠
acyl-CoA dehydrogenase, putative
— OG7
LPAL13_250027500 ⚠
hypothetical protein, conserved
— OG7
LPAL13_230008600 ⚠
tryptophanyl-tRNA synthetase, putative
— OG7
LPAL13_220009500 ⚠
Putative tRNA binding domain containing prote
— OG7
LPAL13_200025600 ⚠
asparaginyl-tRNA synthetase, putative
— OG7
LPAL13_220014600 ⚠
translation initiation factor IF-2, putative
— OG7
LPAL13_140018600 ⚠
serine hydroxymethyltransferase (SHMT-L)
— OG7
LPAL13_180014400 ⚠
Multisite-specific tRNA:(cytosine-C(5))-methy
— OG7
LPAL13_350006200 ⚠
PUB domain containing protein, putative
— OG7
LPAL13_260014500 ⚠
Glucosidase II beta subunit-like protein, put
— OG7
LPAL13_250014900 ⚠
protein kinase, putative
— OG7
LPAL13_250024300 ⚠
hypothetical protein, conserved
— OG7
LPAL13_030010800 ⚠
hypothetical protein, conserved
— OG7
Page 1 of 2
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.