TcIL3000.11.2830

ribosome assembly protein RRB1, putative
Trypanosoma congolense IL3000 OG6: OG6_102504 OG7: OG7_0007856 268 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
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Interactions 268 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_0_30260 ⚠
guide RNA associated protein, GAP2
— Both
TcIL3000_10_11660 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_30110 ⚠
WD domain, G-beta repeat, putative
— Both
TcIL3000_9_1520 ⚠
ubiquitin-activating enzyme E1, putative
— OG7
TcIL3000_5_3890 ⚠
ubiquitin-activating enzyme E1, putative
— Both
TcIL3000_0_21000 ⚠
hypothetical protein, conserved (fragment)
— Both
TcIL3000_10_10990 ⚠
bifunctional aminoacyl-tRNA synthetase, putat
— Both
TcIL3000_6_2460 ⚠
pseudouridine synthase A-like protein, putati
— Both
TcIL3000_0_13010 ⚠
WD domain, G-beta repeat, putative
— Both
TcIL3000_10_2340 ⚠
hypothetical protein, conserved
— Both
TcIL3000_10_10910 ⚠
hypothetical protein, conserved
— Both
TcIL3000_7_1020 ⚠
pseudouridylate synthase I, putative
— OG7
TcIL3000_10_13410 ⚠
tRNA pseudouridine synthase A-like protein, p
— OG7
TcIL3000_6_1570 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_31300 ⚠
co-chaperone GrpE, putative
— OG7
TcIL3000_9_4170 ⚠
synaptojanin (N-terminal domain), putative
— OG7
TcIL3000_6_2060 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_8_1450 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_0_25450 ⚠
SPRY domain containing protein, putative (fra
— OG7
TcIL3000_0_11960 ⚠
HECT-domain (ubiquitin-transferase), putative
— OG7
TcIL3000_0_55120 ⚠
hypothetical protein
— OG7
TcIL3000_8_5130 ⚠
WW domain containing protein, putative
— OG7
TcIL3000_10_7240 ⚠
Concanavalin A-like lectin/glucanases superfa
— OG7
TcIL3000_10_7230 ⚠
Concanavalin A-like lectin/glucanases superfa
— OG7
TcIL3000_9_5080 ⚠
replication factor C, subunit 3, putative (fr
— OG7
TcIL3000_6_3350 ⚠
replication factor C, subunit 2, putative
— OG7
TcIL3000_0_50610 ⚠
Replication Factor C Subunit 1-related protei
— OG7
TcIL3000_10_6860 ⚠
replication factor C subunit 3, putative
— OG7
TcIL3000_0_25410 ⚠
ATPase family associated with various cellula
— OG7
TcIL3000_0_39040 ⚠
hypothetical protein (fragment)
— OG7
TcIL3000.11.10020 ⚠
replication factor C, subunit 4, putative
— OG7
TcIL3000_1_1350 ⚠
pumillio RNA binding protein, putative
— OG7
TcIL3000_10_170 ⚠
pumillio/PUF RNA binding protein 3
— OG7
TcIL3000_10_3630 ⚠
pumillo RNA binding protein PUF1, putative
— OG7
TcIL3000_6_350 ⚠
pumillio RNA binding protein 4, putative
— OG7
TcIL3000_0_32780 ⚠
pumilio/PUF RNA binding protein 5
— OG7
TcIL3000_0_29030 ⚠
geranylgeranyl transferase type II beta subun
— OG7
TcIL3000_4_310 ⚠
geranylgeranyl transferase type II beta subun
— OG7
TcIL3000.11.2280 ⚠
metallo-peptidase, Clan MF, Family M17 (fragm
— OG7
TcIL3000_0_58910 ⚠
hypothetical protein (fragment)
— OG7
TcIL3000_4_3480 ⚠
Kinesin-13 4, putative
— OG7
TcIL3000_10_7200 ⚠
ribonuclease, putative
— Both
TcIL3000_6_1480 ⚠
aspartyl-tRNA synthetase, putative
— Both
TcIL3000_10_1050 ⚠
OB-fold nucleic acid binding domain/tRNA synt
— Both
TcIL3000_1_1430 ⚠
amidohydrolase, putative
— Both
TcIL3000_0_41370 ⚠
Poly(A)-specific ribonuclease PARN-1
— Both
TcIL3000_0_19920 ⚠
kinesin, putative
— Both
TcIL3000_9_770 ⚠
hypothetical protein (fragment)
— Both
TcIL3000_0_15160 ⚠
ribonucleoside-diphosphate reductase small ch
— Both
TcIL3000.11.5550 ⚠
Kinesin-13 3, putative
— Both
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.